Caviibacterium pharyngocola strain 7.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Caviibacterium

Description

Caviibacterium pharyngocola strain 7.3 is characterized by having a single replicon, which indicates a streamlined genome organization. This trait can be significant in understanding the organism's replication and stability under various environmental conditions. The strain is cataloged under the accession number PHGZ00000000.1, which provides a unique identifier for its genomic sequence in biological databases. Caviibacterium pharyngocola is part of a genus known for its specific ecological niche, often associated with the pharyngeal microbiome of certain animal hosts. Although specific ecological interactions or roles of strain 7.3 in its environment are not detailed, the presence of a single replicon suggests that it may exhibit efficient resource utilization, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic characteristics of Caviibacterium pharyngocola strain 7.3, including its replicon structure, can aid in elucidating its evolutionary adaptations and ecological functions. This knowledge could ultimately contribute to insights into the dynamics of microbial communities in which this strain is found, highlighting its potential role in maintaining or disrupting ecological balances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCaviibacterium
SpeciesCaviibacterium pharyngocola
Strainstrain 7.3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caviibacterium pharyngocola strain 7.3 contig_43, whole genome

Gene Summary

Adenine Count

705894 bp

Thymine Count

700570 bp

Guanine Count

544245 bp

Cytosine Count

535577 bp

Genome Length

2486286 bp

Protein-coding Genes

2236 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded-dna-specific exonuclease recjCVP04_06995Not AvailablePositive1455950 - 145767163439.8
thiol:disulfide interchange proteinCVP04_07000Not AvailablePositive1457688 - 145835925476.3
5'-methylthioadenosine/s-adenosylhomocysteine nucleosidaseCVP04_07005Not AvailablePositive1458359 - 145904823612.7
merr family transcriptional regulatorCVP04_07010Not AvailableNegative1459059 - 145947216007.7
hypothetical proteinCVP04_07015Not AvailablePositive1459556 - 146023925294.1
hypothetical proteinCVP04_07020Not AvailablePositive1460239 - 146074518705.2
cobalamin biosynthesis protein cbimCVP04_07025Not AvailablePositive1460745 - 146135321274.2
abc transporter permeaseCVP04_07030Not AvailablePositive1461350 - 146200025183.9
cobalt abc transporter atp-binding proteinCVP04_07035Not AvailablePositive1461997 - 146263523656.5
tonb-dependent receptorCVP04_07040Not AvailablePositive1462857 - 146537395030.6

Displaying genes 1451 – 1460 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.