Caviibacterium pharyngocola strain 7.3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Caviibacterium

Description

Caviibacterium pharyngocola strain 7.3 is characterized by having a single replicon, which indicates a streamlined genome organization. This trait can be significant in understanding the organism's replication and stability under various environmental conditions. The strain is cataloged under the accession number PHGZ00000000.1, which provides a unique identifier for its genomic sequence in biological databases. Caviibacterium pharyngocola is part of a genus known for its specific ecological niche, often associated with the pharyngeal microbiome of certain animal hosts. Although specific ecological interactions or roles of strain 7.3 in its environment are not detailed, the presence of a single replicon suggests that it may exhibit efficient resource utilization, potentially allowing it to thrive in competitive microbial communities. Understanding the genomic characteristics of Caviibacterium pharyngocola strain 7.3, including its replicon structure, can aid in elucidating its evolutionary adaptations and ecological functions. This knowledge could ultimately contribute to insights into the dynamics of microbial communities in which this strain is found, highlighting its potential role in maintaining or disrupting ecological balances.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusCaviibacterium
SpeciesCaviibacterium pharyngocola
Strainstrain 7.3

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caviibacterium pharyngocola strain 7.3 contig_43, whole genome

Gene Summary

Adenine Count

705894 bp

Thymine Count

700570 bp

Guanine Count

544245 bp

Cytosine Count

535577 bp

Genome Length

2486286 bp

Protein-coding Genes

2236 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyethylthiazole kinaseCVP04_04670Not AvailableNegative966336 - 96713627789.3
bifunctionalCVP04_04675Not AvailablePositive967406 - 970348113433.0
peptidase tCVP04_04680Not AvailableNegative970518 - 97176846421.2
spermidine/putrescine abc transporter atp-binding protein potaCVP04_04685Not AvailablePositive972047 - 97316542251.8
spermidine/putrescine abc transporter permease potbCVP04_04690Not AvailablePositive973149 - 97400931901.9
spermidine/putrescine abc transporter permease potcCVP04_04695Not AvailablePositive974009 - 97477928479.8
spermidine/putrescine abc transporter substrate-binding proteinCVP04_04700Not AvailablePositive974935 - 97603240268.8
spermidine/putrescine abc transporter substrate-binding proteinCVP04_04705Not AvailablePositive976249 - 97729538965.4
dna glycosylaseCVP04_04710Not AvailableNegative977320 - 97791322914.8
hypothetical proteinCVP04_04715Not AvailableNegative977950 - 9781447465.11

Displaying genes 991 – 1000 of 2398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.