Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola lipolyticus |
| Strain | strain 157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
928656 bp
Thymine Count
926220 bp
Guanine Count
1686959 bp
Cytosine Count
1693075 bp
Genome Length
5235224 bp
Protein-coding Genes
5157 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CVM52_21965 | Not Available | Positive | 4506560 - 4507437 | 31587.0 |
| rip metalloprotease rsep | CVM52_21970 | Not Available | Positive | 4507442 - 4508797 | 47474.2 |
| outer membrane protein assembly factor bama | CVM52_21975 | Not Available | Positive | 4509244 - 4511607 | 87390.5 |
| outer membrane chaperone skp | CVM52_21980 | Not Available | Positive | 4511642 - 4512241 | 21682.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | CVM52_21985 | Not Available | Positive | 4512305 - 4512769 | 16769.7 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | CVM52_21990 | Not Available | Positive | 4512773 - 4513558 | 27589.2 |
| duf1009 domain-containing protein | CVM52_21995 | Not Available | Positive | 4513563 - 4513868 | 10529.0 |
| type vi secretion system-associated protein tagf | CVM52_22000 | Not Available | Negative | 4513869 - 4514149 | 9854.15 |
| type vi secretion system membrane subunit tssm | CVM52_22005 | Not Available | Negative | 4514149 - 4517718 | 130646.0 |
| type vi secretion system protein tssl | CVM52_22010 | Not Available | Negative | 4517715 - 4519124 | 50605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
