Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola lipolyticus |
| Strain | strain 157 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
928656 bp
Thymine Count
926220 bp
Guanine Count
1686959 bp
Cytosine Count
1693075 bp
Genome Length
5235224 bp
Protein-coding Genes
5157 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath large subunit | CVM52_18010 | Not Available | Positive | 3750946 - 3752442 | 55933.7 |
| hcp1 family type vi secretion system effector | CVM52_18015 | Not Available | Positive | 3752508 - 3753005 | 18351.7 |
| virulence protein scie type | CVM52_18020 | Not Available | Positive | 3753087 - 3753899 | 29007.8 |
| type vi secretion system baseplate subunit tsse | CVM52_18025 | Not Available | Positive | 3753892 - 3754389 | 18840.4 |
| type vi secretion system baseplate subunit tssf | CVM52_18030 | Not Available | Positive | 3754389 - 3756266 | 69759.7 |
| type vi secretion system baseplate subunit tssg | CVM52_18035 | Not Available | Positive | 3756230 - 3757300 | 38996.3 |
| type vi secretion system atpase tssh | CVM52_18040 | Not Available | Positive | 3757305 - 3760013 | 98200.1 |
| ion transporter | CVM52_18045 | Not Available | Positive | 3760080 - 3760955 | 32553.7 |
| type vi secretion system tip protein vgrg | CVM52_18050 | Not Available | Positive | 3761020 - 3763173 | 80488.1 |
| hypothetical protein | CVM52_18055 | Not Available | Positive | 3763186 - 3763797 | 21537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
