Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CUU80_05010 | Not Available | Negative | 1187308 - 1189401 | 76199.8 |
| hypoxanthine phosphoribosyltransferase | CUU80_05015 | Not Available | Negative | 1189405 - 1189962 | 20473.2 |
| trna lysidine(34) synthetase tils | CUU80_05020 | Not Available | Negative | 1189949 - 1191097 | 41436.4 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | CUU80_05025 | Not Available | Negative | 1191097 - 1192590 | 50930.8 |
| abc transporter permease | CUU80_05030 | Not Available | Negative | 1192655 - 1194313 | 58267.4 |
| abc transporter atp-binding protein | CUU80_05035 | Not Available | Negative | 1194310 - 1195266 | 33863.7 |
| n-acetylglucosaminyltransferase | CUU80_05040 | Not Available | Negative | 1195725 - 1196948 | 45842.8 |
| ai-2e family transporter | CUU80_05045 | Not Available | Negative | 1196948 - 1198495 | 56102.0 |
| glycosyl transferase | CUU80_05050 | Not Available | Positive | 1198747 - 1199673 | 35158.2 |
| lactaldehyde reductase | CUU80_05055 | Not Available | Negative | 1199876 - 1201027 | 40598.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


