Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | CUU80_04910 | Not Available | Negative | 1162445 - 1163656 | 42057.3 |
| abc transporter atp-binding protein | CUU80_04915 | Not Available | Negative | 1163772 - 1165343 | 57818.7 |
| abc transporter substrate-binding protein | CUU80_04920 | Not Available | Negative | 1165510 - 1166619 | 39438.1 |
| hypothetical protein | CUU80_04925 | Not Available | Negative | 1167204 - 1167398 | 6888.83 |
| hypothetical protein | CUU80_04930 | Not Available | Negative | 1167954 - 1169945 | 72859.5 |
| sugar o-acetyltransferase | CUU80_04935 | Not Available | Negative | 1170121 - 1170753 | 23275.7 |
| xylose isomerase | CUU80_04940 | Not Available | Negative | 1171272 - 1172621 | 50645.3 |
| hypothetical protein | CUU80_04945 | Not Available | Negative | 1172992 - 1173786 | 30105.4 |
| peptide deformylase | CUU80_04950 | Not Available | Negative | 1174235 - 1174654 | 15828.9 |
| Trna-asp | Not Available | Not Available | Positive | 1174800 - 1174876 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


