Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_04805 | Not Available | Positive | 1134080 - 1134472 | 14978.7 |
| crispr-associated endonuclease cas2 | CUU80_04810 | Not Available | Negative | 1136164 - 1136496 | 12676.3 |
| type ii crispr-associated endonuclease cas1 | CUU80_04815 | Not Available | Negative | 1136493 - 1137398 | 33126.7 |
| restriction endonuclease | CUU80_04820 | Not Available | Negative | 1137401 - 1140817 | 128499.0 |
| atp-dependent endonuclease | CUU80_04825 | Not Available | Negative | 1141055 - 1142467 | 50928.8 |
| oligoribonuclease | CUU80_04830 | Not Available | Negative | 1142640 - 1143290 | 24412.9 |
| class c sortase | CUU80_04835 | Not Available | Negative | 1143582 - 1144550 | 35139.3 |
| hypothetical protein | CUU80_04840 | Not Available | Negative | 1144716 - 1146338 | 54849.9 |
| hypothetical protein | CUU80_04845 | Not Available | Negative | 1146554 - 1150135 | 125917.0 |
| imp dehydrogenase | CUU80_04850 | Not Available | Negative | 1150603 - 1152156 | 54977.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


