Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CUU80_04540 | Not Available | Negative | 1068336 - 1069547 | 44661.1 |
| xre family transcriptional regulator | CUU80_04545 | Not Available | Positive | 1069862 - 1070131 | 9905.83 |
| dihydroxy-acid dehydratase | CUU80_04555 | Not Available | Negative | 1073108 - 1074973 | 66685.8 |
| dna-directed rna polymerase subunit omega | CUU80_04560 | Not Available | Positive | 1075190 - 1075504 | 11462.2 |
| methionine adenosyltransferase | CUU80_04565 | Not Available | Positive | 1075776 - 1076999 | 43999.7 |
| guanine deaminase | CUU80_04570 | Not Available | Negative | 1077079 - 1078461 | 50647.3 |
| mfs transporter | CUU80_04575 | Not Available | Negative | 1078575 - 1079984 | 49783.9 |
| nucleoside hydrolase | CUU80_04580 | Not Available | Negative | 1080044 - 1081000 | 34106.9 |
| isoleucine--trna ligase | CUU80_04585 | Not Available | Negative | 1081192 - 1084497 | 124177.0 |
| had family hydrolase | CUU80_04595 | Not Available | Positive | 1085060 - 1085764 | 25701.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


