Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation transporter | CUU80_00115 | Not Available | Negative | 29459 - 30406 | 33657.4 |
| repressor lexa | CUU80_00120 | Not Available | Negative | 30624 - 31343 | 26082.9 |
| peptidoglycan-binding protein | CUU80_00125 | Not Available | Positive | 31612 - 31863 | 8870.64 |
| transcriptional regulator nrdr | CUU80_00130 | Not Available | Positive | 32105 - 32545 | 16558.9 |
| phosphoglycerate dehydrogenase | CUU80_00135 | Not Available | Negative | 32862 - 34061 | 43230.7 |
| atp-dependent dna helicase | CUU80_00140 | Not Available | Negative | 34073 - 36352 | 83932.8 |
| division/cell wall cluster transcriptional repressor mraz | CUU80_00145 | Not Available | Positive | 36677 - 37213 | 19379.1 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | CUU80_00150 | Not Available | Positive | 37213 - 38307 | 40219.9 |
| hypothetical protein | CUU80_00155 | Not Available | Positive | 38494 - 38766 | 9653.63 |
| penicillin-binding protein 2 | CUU80_00160 | Not Available | Positive | 38763 - 40565 | 63914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


