Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease | CUU80_04490 | Not Available | Positive | 1056580 - 1057440 | 30159.3 |
| duf3052 domain-containing protein | CUU80_04495 | Not Available | Positive | 1057554 - 1057970 | 15044.2 |
| Trna-val | Not Available | Not Available | Positive | 1058155 - 1058228 | Not Available |
| atp-dependent helicase | CUU80_04505 | Not Available | Negative | 1058240 - 1059808 | 56730.6 |
| aminoglycoside phosphotransferase | CUU80_04510 | Not Available | Positive | 1059904 - 1061706 | 63428.7 |
| duf3107 domain-containing protein | CUU80_04515 | Not Available | Positive | 1061810 - 1062034 | 7683.04 |
| permease | CUU80_04520 | Not Available | Negative | 1062196 - 1063191 | 36197.2 |
| mate family efflux transporter | CUU80_04525 | Not Available | Negative | 1063301 - 1064638 | 46893.7 |
| gtp-binding protein | CUU80_04530 | Not Available | Negative | 1064905 - 1067061 | 79027.4 |
| dna polymerase iii subunit epsilon | CUU80_04535 | Not Available | Positive | 1067411 - 1068022 | 23263.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


