Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CUU80_04440 | Not Available | Negative | 1042963 - 1044303 | 49479.0 |
| laci family transcriptional regulator | CUU80_04445 | Not Available | Negative | 1044528 - 1045568 | 37700.1 |
| nucleoside hydrolase | CUU80_04450 | Not Available | Positive | 1045672 - 1046916 | 43104.9 |
| isoprenyl transferase | CUU80_04455 | Not Available | Negative | 1047075 - 1047863 | 29978.7 |
| dna repair protein reco | CUU80_04460 | Not Available | Negative | 1047866 - 1048585 | 25964.2 |
| alpha/beta hydrolase | CUU80_04465 | Not Available | Negative | 1048646 - 1050445 | 64750.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CUU80_04470 | Not Available | Negative | 1050553 - 1051764 | 42658.7 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CUU80_04475 | Not Available | Negative | 1051773 - 1052963 | 42090.1 |
| diviva domain-containing protein | CUU80_04480 | Not Available | Negative | 1052960 - 1054624 | 58058.0 |
| hydrolase | CUU80_04485 | Not Available | Negative | 1054734 - 1056446 | 60229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


