Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate phosphorylase | CUU80_04390 | Not Available | Positive | 1029155 - 1031890 | 99538.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | CUU80_04395 | Not Available | Positive | 1031925 - 1032719 | 27667.1 |
| thiamine-binding protein | CUU80_04400 | Not Available | Positive | 1032731 - 1033102 | 13233.8 |
| mfs transporter | CUU80_04405 | Not Available | Positive | 1033462 - 1034841 | 48904.8 |
| serpin family protein | CUU80_04410 | Not Available | Positive | 1034978 - 1036345 | 49443.1 |
| abc transporter substrate-binding protein | CUU80_04415 | Not Available | Negative | 1036435 - 1037499 | 38273.7 |
| endonuclease | CUU80_04420 | Not Available | Negative | 1037786 - 1038496 | 26391.1 |
| sam-dependent methyltransferase | CUU80_04425 | Not Available | Negative | 1038493 - 1040094 | 60022.6 |
| abc transporter permease | CUU80_04430 | Not Available | Negative | 1040146 - 1040928 | 28073.6 |
| beta-(1-2)-fructofuranosidase | CUU80_04435 | Not Available | Negative | 1041165 - 1042736 | 58974.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


