Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_04290 | Not Available | Negative | 1005749 - 1007140 | 50517.3 |
| dna-binding response regulator | CUU80_04295 | Not Available | Negative | 1007137 - 1007862 | 27294.8 |
| pup--protein ligase | CUU80_04300 | Not Available | Negative | 1007955 - 1009460 | 55752.8 |
| ubiquitin-like protein pup | CUU80_04305 | Not Available | Negative | 1009460 - 1009663 | 7485.16 |
| inositol monophosphatase | CUU80_04310 | Not Available | Negative | 1009706 - 1010566 | 31675.8 |
| proteasome accessory factor pafa2 | CUU80_04315 | Not Available | Negative | 1010584 - 1012311 | 63627.9 |
| proteasome atpase | CUU80_04320 | Not Available | Negative | 1012355 - 1013923 | 56809.2 |
| deda family protein | CUU80_04325 | Not Available | Negative | 1013989 - 1014708 | 25477.4 |
| phosphoserine phosphatase serb | CUU80_04330 | Not Available | Positive | 1014747 - 1015502 | 27037.3 |
| primosome assembly protein pria | CUU80_04335 | Not Available | Positive | 1015556 - 1017928 | 85416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


