Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_04240 | Not Available | Negative | 989446 - 990318 | 30134.8 |
| abc transporter | CUU80_04245 | Not Available | Negative | 990315 - 991262 | 33683.7 |
| dna-binding response regulator | CUU80_04250 | Not Available | Negative | 991531 - 992385 | 30658.6 |
| adenylosuccinate lyase | CUU80_04255 | Not Available | Positive | 992481 - 993917 | 53424.3 |
| tigr00374 family protein | CUU80_04260 | Not Available | Positive | 994081 - 996573 | 89244.1 |
| integration host factor | CUU80_04265 | Not Available | Positive | 996769 - 997050 | 9911.91 |
| glycoside hydrolase family 2 | CUU80_04270 | Not Available | Negative | 997174 - 999756 | 93767.2 |
| glycosyl hydrolase family 3 | CUU80_04275 | Not Available | Negative | 1000118 - 1003318 | 116605.0 |
| hypothetical protein | CUU80_04280 | Not Available | Negative | 1003374 - 1003964 | 21330.5 |
| alpha-n-arabinofuranosidase | CUU80_04285 | Not Available | Negative | 1004014 - 1005624 | 59114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


