Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CUU80_04190 | Not Available | Positive | 980887 - 981981 | 39131.6 |
| duf58 domain-containing protein | CUU80_04195 | Not Available | Positive | 982053 - 982928 | 32403.8 |
| hypothetical protein | CUU80_04200 | Not Available | Positive | 982958 - 983506 | 19703.2 |
| vwa domain-containing protein | CUU80_04205 | Not Available | Positive | 983503 - 984561 | 38582.8 |
| hypothetical protein | CUU80_04210 | Not Available | Positive | 984558 - 985589 | 36117.7 |
| cell surface protein | CUU80_04215 | Not Available | Positive | 985673 - 986179 | 17780.3 |
| hypothetical protein | CUU80_04220 | Not Available | Negative | 986209 - 986418 | 7601.33 |
| hypothetical protein | CUU80_04225 | Not Available | Positive | 986411 - 986740 | 11933.2 |
| hypothetical protein | CUU80_04230 | Not Available | Positive | 986747 - 988357 | 56795.9 |
| sensor histidine kinase | CUU80_04235 | Not Available | Negative | 988481 - 989428 | 34331.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


