Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CUU80_04080 | Not Available | Negative | 951498 - 952337 | 29951.7 |
| glutamate abc transporter atp-binding protein | CUU80_04085 | Not Available | Negative | 952383 - 953183 | 29493.9 |
| hypothetical protein | CUU80_04090 | Not Available | Negative | 953320 - 953871 | 19466.4 |
| abc transporter atp-binding protein | CUU80_04095 | Not Available | Negative | 954104 - 955690 | 57726.1 |
| aspartate--trna ligase | CUU80_04100 | Not Available | Negative | 955952 - 957751 | 67048.0 |
| histidine--trna ligase | CUU80_04105 | Not Available | Negative | 957804 - 959204 | 50308.6 |
| duf349 domain-containing protein | CUU80_04110 | Not Available | Positive | 959326 - 960774 | 53384.2 |
| bifunctional metallophosphatase/5'-nucleotidase | CUU80_04115 | Not Available | Negative | 961160 - 962998 | 64934.8 |
| acetolactate synthase large subunit | CUU80_04120 | Not Available | Positive | 963158 - 964882 | 62807.6 |
| atp-dependent clp protease atp-binding subunit clpc | CUU80_04125 | Not Available | Negative | 965101 - 967719 | 95713.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


