Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell surface protein | CUU80_03965 | Not Available | Negative | 914100 - 921797 | 263136.0 |
| ecf transporter s component | CUU80_03970 | Not Available | Positive | 923179 - 923826 | 22651.4 |
| cobalt abc transporter | CUU80_03975 | Not Available | Positive | 924078 - 926372 | 82267.2 |
| ribosome assembly rna-binding protein yhby | CUU80_03980 | Not Available | Positive | 926448 - 926753 | 11307.6 |
| glycerophosphodiester phosphodiesterase | CUU80_03990 | Not Available | Positive | 927959 - 928378 | 15683.5 |
| d-2-hydroxyacid dehydrogenase | CUU80_03995 | Not Available | Negative | 928585 - 929481 | 32476.1 |
| mfs transporter | CUU80_04000 | Not Available | Negative | 929730 - 931196 | 50695.0 |
| sugar abc transporter permease | CUU80_04005 | Not Available | Negative | 931577 - 932596 | 35704.1 |
| sugar abc transporter permease | CUU80_04010 | Not Available | Negative | 932593 - 933663 | 37014.0 |
| sugar abc transporter atp-binding protein | CUU80_04015 | Not Available | Negative | 933665 - 935206 | 55811.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


