Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CUU80_03865 | Not Available | Negative | 879443 - 880069 | 21787.9 |
| hypothetical protein | CUU80_03870 | Not Available | Negative | 880353 - 887810 | 253138.0 |
| dipeptidase | CUU80_03875 | Not Available | Negative | 887960 - 889351 | 48865.4 |
| duf3043 domain-containing protein | CUU80_03880 | Not Available | Positive | 889445 - 890065 | 23738.2 |
| dihydrolipoamide dehydrogenase | CUU80_03885 | Not Available | Positive | 890258 - 891745 | 52284.4 |
| duf4191 domain-containing protein | CUU80_03890 | Not Available | Positive | 891893 - 892675 | 29183.3 |
| type i glutamate--ammonia ligase | CUU80_03895 | Not Available | Positive | 893022 - 894458 | 53142.5 |
| hypothetical protein | CUU80_03900 | Not Available | Negative | 894618 - 894992 | 14167.9 |
| mrp family atp-binding protein | CUU80_03905 | Not Available | Negative | 895022 - 896161 | 40302.3 |
| dna ligase (nad(+)) liga | CUU80_03910 | Not Available | Negative | 896218 - 898905 | 97820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


