Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | CUU80_03505 | Not Available | Positive | 794847 - 797099 | 84168.2 |
| dna-binding response regulator | CUU80_03510 | Not Available | Positive | 797128 - 797850 | 26256.8 |
| hamp domain-containing histidine kinase | CUU80_03515 | Not Available | Positive | 797847 - 798917 | 39008.6 |
| peptidase s24 | CUU80_03520 | Not Available | Positive | 799066 - 799443 | 13178.8 |
| comf family protein | CUU80_03525 | Not Available | Negative | 799350 - 800057 | 25278.5 |
| had family hydrolase | CUU80_03530 | Not Available | Negative | 800127 - 800939 | 30068.9 |
| hypothetical protein | CUU80_03535 | Not Available | Positive | 801035 - 801463 | 16548.0 |
| hypothetical protein | CUU80_03540 | Not Available | Negative | 801500 - 803053 | 53050.9 |
| hypothetical protein | CUU80_03545 | Not Available | Negative | 803050 - 806145 | 112670.0 |
| whib family transcriptional regulator | CUU80_03550 | Not Available | Negative | 806188 - 806487 | 11665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


