Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 2944 - 3060 | Not Available |
| histidinol dehydrogenase | CUU80_00020 | Not Available | Positive | 3185 - 4567 | 48802.0 |
| histidinol-phosphate transaminase | CUU80_00025 | Not Available | Positive | 4692 - 5864 | 42937.0 |
| imidazoleglycerol-phosphate dehydratase hisb | CUU80_00030 | Not Available | Positive | 6035 - 6637 | 21833.2 |
| hypothetical protein | CUU80_00035 | Not Available | Positive | 6637 - 7428 | 27196.0 |
| imidazole glycerol phosphate synthase subunit hish | CUU80_00040 | Not Available | Positive | 7595 - 8242 | 23091.1 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | CUU80_00045 | Not Available | Positive | 8352 - 9077 | 25762.4 |
| duf2252 domain-containing protein | CUU80_00050 | Not Available | Negative | 9326 - 10765 | 54062.1 |
| type i glutamate--ammonia ligase | CUU80_00055 | Not Available | Positive | 10956 - 12293 | 50055.1 |
| mfs transporter | CUU80_00060 | Not Available | Positive | 12542 - 13780 | 44737.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


