Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | CUU80_03350 | Not Available | Positive | 762261 - 763643 | 49315.1 |
| ribosome silencing factor | CUU80_03355 | Not Available | Positive | 763647 - 764072 | 15786.7 |
| histidine phosphatase family protein | CUU80_03360 | Not Available | Positive | 764085 - 764822 | 27655.2 |
| Trna-ala | Not Available | Not Available | Positive | 764955 - 765027 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 765042 - 765117 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 765165 - 765237 | Not Available |
| phosphate acetyltransferase | CUU80_03380 | Not Available | Positive | 765420 - 767090 | 59330.2 |
| acetate kinase | CUU80_03385 | Not Available | Positive | 767365 - 768594 | 44194.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CUU80_03390 | Not Available | Negative | 768678 - 770018 | 46981.6 |
| hypothetical protein | CUU80_03400 | Not Available | Positive | 770253 - 770966 | 26776.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


