Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | CUU80_03300 | Not Available | Negative | 747528 - 748727 | 43300.3 |
| abc transporter substrate-binding protein | CUU80_03305 | Not Available | Negative | 748871 - 749842 | 34781.7 |
| cof-type had-iib family hydrolase | CUU80_03310 | Not Available | Positive | 750027 - 750848 | 30242.7 |
| phosphoketolase | CUU80_03315 | Not Available | Negative | 751000 - 753477 | 92535.3 |
| gmp synthase (glutamine-hydrolyzing) | CUU80_03320 | Not Available | Positive | 753921 - 755483 | 56150.2 |
| restriction endonuclease | CUU80_03325 | Not Available | Positive | 756097 - 757053 | 35332.9 |
| hypothetical protein | CUU80_03330 | Not Available | Positive | 757170 - 758651 | 54500.9 |
| acetyltransferase | CUU80_03335 | Not Available | Positive | 758937 - 760754 | 66482.7 |
| ribose-phosphate pyrophosphokinase | CUU80_03340 | Not Available | Positive | 760949 - 761971 | 36864.4 |
| Trna-gln | Not Available | Not Available | Positive | 762097 - 762167 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


