Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | CUU80_03150 | Not Available | Negative | 715112 - 715558 | 16297.5 |
| 3-dehydroquinate synthase | CUU80_03155 | Not Available | Negative | 715711 - 717339 | 58722.2 |
| chorismate synthase | CUU80_03160 | Not Available | Negative | 717336 - 718529 | 42366.7 |
| peptidase a24 | CUU80_03165 | Not Available | Positive | 718578 - 719048 | 16822.4 |
| endolytic transglycosylase mltg | CUU80_03170 | Not Available | Negative | 719061 - 720239 | 42246.6 |
| holliday junction resolvase ruvx | CUU80_03175 | Not Available | Negative | 720250 - 720720 | 17369.4 |
| alanine--trna ligase | CUU80_03180 | Not Available | Negative | 720717 - 723398 | 97475.5 |
| hypothetical protein | CUU80_03185 | Not Available | Negative | 723513 - 723749 | 9006.9 |
| duf948 domain-containing protein | CUU80_03190 | Not Available | Negative | 723749 - 724141 | 13504.3 |
| histidine phosphatase family protein | CUU80_03195 | Not Available | Negative | 724270 - 724944 | 24874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


