Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_03100 | Not Available | Positive | 703665 - 704336 | 25674.8 |
| hypothetical protein | CUU80_03105 | Not Available | Positive | 704333 - 704641 | 11554.7 |
| 4-hydroxybutyrate dehydrogenase | CUU80_03110 | Not Available | Positive | 704797 - 705936 | 41476.1 |
| branched chain amino acid aminotransferase | CUU80_03115 | Not Available | Negative | 706079 - 707206 | 41490.2 |
| 50s ribosomal protein l25 | CUU80_03120 | Not Available | Negative | 707558 - 708181 | 21900.2 |
| alpha/beta hydrolase | CUU80_03125 | Not Available | Positive | 708528 - 709526 | 37027.7 |
| nad(p) transhydrogenase subunit beta | CUU80_03130 | Not Available | Negative | 709683 - 711107 | 49059.0 |
| nad(p) transhydrogenase subunit alpha | CUU80_03135 | Not Available | Negative | 711107 - 711412 | 10640.5 |
| nad(p) transhydrogenase subunit alpha | CUU80_03140 | Not Available | Negative | 711434 - 712597 | 39593.1 |
| long-chain fatty acid--coa ligase | CUU80_03145 | Not Available | Positive | 712873 - 714909 | 73965.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


