Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | CUU80_02940 | Not Available | Positive | 667703 - 668638 | 33728.4 |
| hypothetical protein | CUU80_02945 | Not Available | Positive | 668774 - 669871 | 36830.4 |
| peptidylprolyl isomerase | CUU80_02950 | Not Available | Positive | 670013 - 670552 | 19347.7 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | CUU80_02955 | Not Available | Negative | 670684 - 673008 | 86180.1 |
| dutp diphosphatase | CUU80_02960 | Not Available | Negative | 673219 - 673695 | 16803.0 |
| dutpase | CUU80_02965 | Not Available | Negative | 673695 - 673988 | 10656.8 |
| hypothetical protein | CUU80_02970 | Not Available | Positive | 674456 - 677215 | 95894.8 |
| hypothetical protein | CUU80_02975 | Not Available | Positive | 677551 - 678690 | 40100.7 |
| nucleotide pyrophosphatase | CUU80_02980 | Not Available | Negative | 678693 - 679985 | 45929.1 |
| dna topoisomerase iv | CUU80_02985 | Not Available | Positive | 680223 - 682934 | 97232.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


