Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | CUU80_02890 | Not Available | Negative | 654026 - 654997 | 34492.4 |
| imidazolonepropionase | CUU80_02895 | Not Available | Negative | 655107 - 656465 | 48414.3 |
| competence protein | CUU80_02900 | Not Available | Negative | 656608 - 658419 | 65671.5 |
| competence protein comea | CUU80_02905 | Not Available | Negative | 658429 - 659058 | 22382.9 |
| leucine--trna ligase | CUU80_02910 | Not Available | Negative | 659448 - 662411 | 110669.0 |
| abc transporter substrate-binding protein | CUU80_02915 | Not Available | Negative | 662453 - 663370 | 32150.8 |
| magnesium transporter | CUU80_02920 | Not Available | Negative | 663380 - 664330 | 36290.3 |
| histidine phosphatase family protein | CUU80_02925 | Not Available | Negative | 664534 - 665379 | 31242.9 |
| sam-dependent methyltransferase | CUU80_02930 | Not Available | Positive | 665621 - 666943 | 48679.3 |
| flavin-nucleotide-binding protein | CUU80_02935 | Not Available | Negative | 667024 - 667428 | 14661.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


