Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase (nadp(+)) | CUU80_02840 | Not Available | Positive | 646165 - 647385 | 45457.9 |
| hypothetical protein | CUU80_02845 | Not Available | Positive | 647593 - 649209 | 56559.6 |
| m23 family peptidase | CUU80_02850 | Not Available | Negative | 649271 - 650005 | 26798.7 |
| Trna-asn | Not Available | Not Available | Positive | 650413 - 650488 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 650528 - 650600 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 650615 - 650687 | Not Available |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CUU80_02870 | Not Available | Negative | 650846 - 651889 | 35995.2 |
| ribosomal-protein-alanine n-acetyltransferase | CUU80_02875 | Not Available | Negative | 651886 - 652506 | 22886.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | CUU80_02880 | Not Available | Negative | 652506 - 653318 | 28868.4 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | CUU80_02885 | Not Available | Negative | 653391 - 653954 | 19977.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


