Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | CUU80_02740 | Not Available | Negative | 623562 - 626495 | 108572.0 |
| large conductance mechanosensitive channel protein mscl | CUU80_02745 | Not Available | Positive | 626885 - 627328 | 15768.8 |
| hypothetical protein | CUU80_02750 | Not Available | Positive | 627398 - 627763 | 13023.7 |
| mfs transporter | CUU80_02755 | Not Available | Negative | 627911 - 629143 | 43646.4 |
| amino acid permease | CUU80_02760 | Not Available | Negative | 629268 - 630629 | 49025.6 |
| duf1287 domain-containing protein | CUU80_02765 | Not Available | Negative | 630834 - 631637 | 29531.5 |
| anthranilate synthase component i | CUU80_02770 | Not Available | Negative | 631901 - 633457 | 56675.0 |
| phosphoribosyl-amp cyclohydrolase | CUU80_02775 | Not Available | Negative | 633500 - 633910 | 15191.9 |
| imidazole glycerol phosphate synthase subunit hisf | CUU80_02780 | Not Available | Negative | 633951 - 634721 | 27471.7 |
| 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein | CUU80_02785 | Not Available | Positive | 634918 - 635466 | 19741.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


