Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | CUU80_02540 | Not Available | Negative | 581907 - 582299 | 14609.1 |
| holliday junction branch migration dna helicase ruvb | CUU80_02545 | Not Available | Negative | 582393 - 583457 | 38694.6 |
| holliday junction branch migration protein ruva | CUU80_02550 | Not Available | Negative | 583457 - 584086 | 22240.7 |
| crossover junction endodeoxyribonuclease ruvc | CUU80_02555 | Not Available | Negative | 584175 - 584759 | 21019.5 |
| yebc/pmpr family dna-binding transcriptional regulator | CUU80_02560 | Not Available | Negative | 584766 - 585521 | 26989.3 |
| hit family hydrolase | CUU80_02565 | Not Available | Negative | 585661 - 586248 | 22114.5 |
| threonine--trna ligase | CUU80_02570 | Not Available | Negative | 586394 - 588427 | 76758.9 |
| Trna-gly | Not Available | Not Available | Positive | 588574 - 588649 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 588681 - 588753 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 588797 - 588871 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


