Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Portal protein | CUU80_02375 | Not Available | Positive | 550840 - 552237 | 52184.6 |
| Minor capsid protein | CUU80_02380 | Not Available | Positive | 552221 - 553513 | 48504.2 |
| hypothetical protein | CUU80_02385 | Not Available | Positive | 553506 - 553763 | 9665.51 |
| Scaffolding protein | CUU80_02390 | Not Available | Positive | 553846 - 554388 | 19833.8 |
| Capsid | CUU80_02395 | Not Available | Positive | 554399 - 555346 | 33604.1 |
| Capsid fiber protein | CUU80_02400 | Not Available | Positive | 555346 - 555828 | 15551.3 |
| hypothetical protein | CUU80_02405 | Not Available | Positive | 555839 - 556336 | 18334.4 |
| Head-to-tail stopper | CUU80_02410 | Not Available | Positive | 556333 - 556749 | 14883.7 |
| hypothetical protein | CUU80_02415 | Not Available | Positive | 556751 - 557140 | 14089.8 |
| hypothetical protein | CUU80_02420 | Not Available | Positive | 557137 - 557541 | 14701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


