Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | CUU80_01900 | Not Available | Positive | 470290 - 471825 | 54642.0 |
| orotidine-5'-phosphate decarboxylase | CUU80_01905 | Not Available | Positive | 471842 - 472816 | 34362.1 |
| dihydroorotate dehydrogenase electron transfer subunit | CUU80_01910 | Not Available | Positive | 472892 - 473716 | 29602.3 |
| dihydroorotate dehydrogenase | CUU80_01915 | Not Available | Positive | 473719 - 474696 | 34329.2 |
| orotate phosphoribosyltransferase | CUU80_01920 | Not Available | Positive | 474702 - 475397 | 25074.1 |
| hypothetical protein | CUU80_01925 | Not Available | Positive | 475500 - 476645 | 42493.2 |
| hypothetical protein | CUU80_01930 | Not Available | Positive | 476761 - 477435 | 24311.7 |
| hypothetical protein | CUU80_01935 | Not Available | Positive | 477432 - 478184 | 27764.3 |
| lysr family transcriptional regulator | CUU80_01940 | Not Available | Negative | 478248 - 479171 | 35083.1 |
| had family phosphatase | CUU80_01945 | Not Available | Negative | 479212 - 479841 | 23510.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


