Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | CUU80_01645 | Not Available | Negative | 400049 - 400633 | 22080.2 |
| nadh:flavin oxidoreductase | CUU80_01650 | Not Available | Positive | 400723 - 402024 | 47631.2 |
| short-chain dehydrogenase | CUU80_01655 | Not Available | Positive | 402082 - 402906 | 30762.5 |
| hypothetical protein | CUU80_01660 | Not Available | Negative | 402851 - 403039 | 6907.36 |
| peroxiredoxin | CUU80_01665 | Not Available | Negative | 403172 - 403696 | 19001.7 |
| hypothetical protein | CUU80_01670 | Not Available | Negative | 403718 - 404233 | 18852.5 |
| tetr/acrr family transcriptional regulator | CUU80_01675 | Not Available | Negative | 404488 - 405099 | 22921.3 |
| macrolide abc transporter atp-binding protein | CUU80_01680 | Not Available | Positive | 405313 - 406014 | 25598.4 |
| abc transporter permease | CUU80_01685 | Not Available | Positive | 406116 - 409415 | 120335.0 |
| laci family transcriptional regulator | CUU80_01690 | Not Available | Positive | 410548 - 411582 | 37922.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


