Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4418 domain-containing protein | CUU80_01595 | Not Available | Positive | 389681 - 390082 | 13965.0 |
| abc transporter permease | CUU80_01600 | Not Available | Positive | 390084 - 391337 | 44250.9 |
| abc transporter atp-binding protein | CUU80_01605 | Not Available | Positive | 391456 - 392364 | 32483.7 |
| 30s ribosomal protein s4 | CUU80_01610 | Not Available | Positive | 392558 - 393184 | 23713.7 |
| hypothetical protein | CUU80_01615 | Not Available | Positive | 393395 - 394150 | 27224.9 |
| 30s ribosomal protein s20 | CUU80_01620 | Not Available | Negative | 394342 - 394602 | 8918.87 |
| elongation factor 4 | CUU80_01625 | Not Available | Positive | 394774 - 396654 | 69420.3 |
| coproporphyrinogen iii oxidase | CUU80_01630 | Not Available | Positive | 396807 - 398045 | 45215.3 |
| hypothetical protein | CUU80_01635 | Not Available | Positive | 398190 - 398624 | 16139.2 |
| mfs transporter | CUU80_01640 | Not Available | Positive | 398643 - 400046 | 49149.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


