Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyc/corc family transporter | CUU80_01495 | Not Available | Positive | 363657 - 365087 | 52151.3 |
| gtpase era | CUU80_01500 | Not Available | Positive | 365089 - 366081 | 36571.6 |
| dna-binding response regulator | CUU80_01505 | Not Available | Negative | 366149 - 366874 | 25896.8 |
| two-component sensor histidine kinase | CUU80_01510 | Not Available | Negative | 366871 - 368187 | 47851.6 |
| type i restriction endonuclease subunit r | CUU80_01515 | Not Available | Positive | 368372 - 371470 | 118057.0 |
| n-6 dna methylase | CUU80_01520 | Not Available | Positive | 371474 - 372979 | 56469.6 |
| hypothetical protein | CUU80_01525 | Not Available | Positive | 372969 - 374171 | 44992.2 |
| hypothetical protein | CUU80_01530 | Not Available | Negative | 374122 - 374607 | 18297.7 |
| integrase | CUU80_01535 | Not Available | Negative | 374796 - 375767 | 36921.4 |
| abc transporter atp-binding protein | CUU80_01540 | Not Available | Positive | 376658 - 377605 | 34826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


