Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_01345 | Not Available | Positive | 330623 - 331432 | 30637.7 |
| hypothetical protein | CUU80_01350 | Not Available | Negative | 331485 - 331967 | 17654.6 |
| hypothetical protein | CUU80_01355 | Not Available | Positive | 332070 - 332375 | 10743.3 |
| hypothetical protein | CUU80_01360 | Not Available | Negative | 332416 - 333081 | 23790.9 |
| d-tyrosyl-trna(tyr) deacylase | CUU80_01365 | Not Available | Positive | 333234 - 333719 | 17702.2 |
| dna polymerase iii subunit epsilon | CUU80_01370 | Not Available | Negative | 333889 - 335499 | 60235.3 |
| histidine phosphatase family protein | CUU80_01375 | Not Available | Positive | 335819 - 336649 | 32219.9 |
| nitrate reductase | CUU80_01380 | Not Available | Positive | 336802 - 338091 | 45000.0 |
| dead/deah box helicase | CUU80_01385 | Not Available | Positive | 338395 - 340344 | 72469.7 |
| d-hexose-6-phosphate mutarotase | CUU80_01390 | Not Available | Negative | 340485 - 341339 | 30962.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


