Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2442 domain-containing protein | CUU80_01295 | Not Available | Positive | 321340 - 321651 | 11778.7 |
| mfs transporter | CUU80_01300 | Not Available | Negative | 321745 - 323016 | 44258.1 |
| tetr family transcriptional regulator | CUU80_01305 | Not Available | Negative | 323167 - 323829 | 24718.7 |
| pyridoxamine 5-phosphate oxidase | CUU80_01310 | Not Available | Positive | 324366 - 324785 | 15447.3 |
| ligand-binding protein sh3 | CUU80_01315 | Not Available | Positive | 324955 - 325269 | 10952.0 |
| hypothetical protein | CUU80_01320 | Not Available | Negative | 325368 - 326876 | 52575.4 |
| tetr family transcriptional regulator | CUU80_01325 | Not Available | Positive | 327023 - 327643 | 23216.0 |
| mfs transporter | CUU80_01330 | Not Available | Positive | 327794 - 328957 | 39749.0 |
| hypothetical protein | CUU80_01335 | Not Available | Negative | 329017 - 329673 | 24887.6 |
| hypothetical protein | CUU80_01340 | Not Available | Positive | 329840 - 330568 | 27630.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


