Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase | CUU80_01240 | Not Available | Positive | 305975 - 307288 | 47593.9 |
| abc transporter atp-binding protein | CUU80_01245 | Not Available | Positive | 307704 - 308621 | 32652.3 |
| abc transporter permease | CUU80_01250 | Not Available | Positive | 308641 - 311301 | 93271.5 |
| dna-binding response regulator | CUU80_01255 | Not Available | Negative | 311425 - 312177 | 27174.5 |
| histidine kinase | CUU80_01260 | Not Available | Negative | 312281 - 314938 | 95800.3 |
| proline iminopeptidase | CUU80_01265 | Not Available | Positive | 314937 - 316400 | 54458.2 |
| pyrroline-5-carboxylate reductase | CUU80_01270 | Not Available | Positive | 316412 - 317230 | 28381.5 |
| l-serine ammonia-lyase | CUU80_01275 | Not Available | Positive | 317371 - 318828 | 51719.6 |
| redox-regulated atpase ychf | CUU80_01280 | Not Available | Positive | 318883 - 319971 | 39499.1 |
| gnat family n-acetyltransferase | CUU80_01285 | Not Available | Negative | 320171 - 320674 | 18491.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


