Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CUU80_01140 | Not Available | Negative | 285566 - 286759 | 44115.4 |
| hypothetical protein | CUU80_01145 | Not Available | Negative | 287213 - 287476 | 9464.32 |
| xre family transcriptional regulator | CUU80_01150 | Not Available | Positive | 287597 - 288028 | 15136.3 |
| hypothetical protein | CUU80_01155 | Not Available | Positive | 288106 - 288753 | 23232.6 |
| methyltransferase | CUU80_01160 | Not Available | Negative | 288811 - 289476 | 23453.8 |
| (2fe-2s)-binding protein | CUU80_01165 | Not Available | Negative | 289552 - 290532 | 35341.7 |
| succinate dehydrogenase | CUU80_01170 | Not Available | Negative | 290652 - 292523 | 67189.2 |
| dna-processing protein dpra | CUU80_01175 | Not Available | Negative | 292565 - 294163 | 58079.1 |
| aaa family atpase | CUU80_01180 | Not Available | Negative | 294160 - 295692 | 54520.6 |
| yran family protein | CUU80_01185 | Not Available | Negative | 295723 - 296211 | 18597.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


