Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | CUU80_01085 | Not Available | Negative | 268790 - 269602 | 28617.0 |
| beta-galactosidase | CUU80_01090 | Not Available | Negative | 269688 - 272849 | 117598.0 |
| mfs transporter | CUU80_01095 | Not Available | Positive | 273211 - 274692 | 53675.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 278909 - 279005 | Not Available |
| peptidase | CUU80_01100 | Not Available | Negative | 274864 - 279159 | 155862.0 |
| dna repair protein | CUU80_01105 | Not Available | Positive | 279509 - 280996 | 54023.7 |
| hypothetical protein | CUU80_01110 | Not Available | Positive | 280989 - 281753 | 29038.2 |
| hypothetical protein | CUU80_01115 | Not Available | Positive | 282017 - 283189 | 44503.2 |
| transcriptional regulator | CUU80_01125 | Not Available | Negative | 283628 - 284035 | 14288.8 |
| whib family transcriptional regulator | CUU80_01135 | Not Available | Negative | 285042 - 285569 | 19835.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


