Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trag/trad family protein | CUU80_00980 | Not Available | Positive | 247715 - 249382 | 63056.2 |
| abc transporter permease | CUU80_00990 | Not Available | Positive | 250183 - 250869 | 25126.4 |
| hypothetical protein | CUU80_00995 | Not Available | Positive | 250859 - 251557 | 25277.8 |
| hypothetical protein | CUU80_01000 | Not Available | Positive | 251559 - 252245 | 25269.8 |
| abc transporter atp-binding protein | CUU80_01005 | Not Available | Positive | 252311 - 252937 | 23461.4 |
| hypothetical protein | CUU80_01010 | Not Available | Negative | 252944 - 254011 | 39316.8 |
| lytic transglycosylase | CUU80_01015 | Not Available | Negative | 254210 - 255802 | 55771.3 |
| type iv secretion system protein virb4 | CUU80_01020 | Not Available | Negative | 255799 - 258195 | 88546.8 |
| prgi family protein | CUU80_01025 | Not Available | Negative | 258188 - 258568 | 14627.4 |
| hypothetical protein | CUU80_01030 | Not Available | Negative | 258609 - 259454 | 30447.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


