Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CUU80_00825 | Not Available | Positive | 212100 - 213284 | 42284.8 |
| ribokinase | CUU80_00830 | Not Available | Positive | 213465 - 214427 | 33175.1 |
| site-specific integrase | CUU80_00840 | Not Available | Positive | 219079 - 220323 | 47489.5 |
| hypothetical protein | CUU80_00845 | Not Available | Positive | 220713 - 221120 | 14798.5 |
| hypothetical protein | CUU80_00850 | Not Available | Positive | 221528 - 221854 | 12115.2 |
| site-specific integrase | CUU80_00855 | Not Available | Positive | 222291 - 223547 | 48526.6 |
| histidine kinase | CUU80_00860 | Not Available | Negative | 223882 - 224733 | 31735.6 |
| dna-binding response regulator | CUU80_00865 | Not Available | Negative | 225057 - 225722 | 25101.8 |
| glycosyl hydrolase | CUU80_00870 | Not Available | Negative | 225901 - 227937 | 76027.1 |
| sugar abc transporter permease | CUU80_00875 | Not Available | Negative | 228070 - 228942 | 32304.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


