Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_10515 | Not Available | Negative | 2628261 - 2628848 | 22487.9 |
| abc transporter substrate-binding protein | CUU80_10520 | Not Available | Negative | 2628993 - 2630570 | 57972.0 |
| peptide abc transporter atp-binding protein | CUU80_10525 | Not Available | Negative | 2630670 - 2631443 | 28492.1 |
| dipeptide abc transporter atp-binding protein dppd | CUU80_10530 | Not Available | Negative | 2631449 - 2632369 | 32534.9 |
| abc transporter permease | CUU80_10535 | Not Available | Negative | 2632366 - 2633256 | 31433.8 |
| hypothetical protein | CUU80_10540 | Not Available | Negative | 2633243 - 2634220 | 35234.9 |
| hypothetical protein | CUU80_10545 | Not Available | Positive | 2634958 - 2640066 | 190029.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | CUU80_10550 | Not Available | Positive | 2640149 - 2640400 | 9062.71 |
| type ii toxin-antitoxin system pemk/mazf family toxin | CUU80_10555 | Not Available | Positive | 2640403 - 2640777 | 14256.1 |
| hypothetical protein | CUU80_10560 | Not Available | Positive | 2640843 - 2641307 | 17884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


