Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CUU80_10315 | Not Available | Positive | 2563373 - 2564536 | 41740.8 |
| abc transporter permease | CUU80_10320 | Not Available | Positive | 2564839 - 2565798 | 35747.9 |
| abc transporter permease | CUU80_10325 | Not Available | Positive | 2565801 - 2566616 | 29583.8 |
| hypothetical protein | CUU80_10330 | Not Available | Positive | 2566929 - 2568929 | 73849.4 |
| laci family transcriptional regulator | CUU80_10335 | Not Available | Negative | 2569013 - 2570059 | 37759.2 |
| beta-galactosidase | CUU80_10340 | Not Available | Negative | 2570157 - 2572319 | 81894.7 |
| abc transporter permease | CUU80_10345 | Not Available | Negative | 2572503 - 2573411 | 33338.0 |
| sugar abc transporter permease | CUU80_10350 | Not Available | Negative | 2573415 - 2574338 | 34269.3 |
| abc transporter substrate-binding protein | CUU80_10355 | Not Available | Negative | 2574429 - 2575820 | 50843.9 |
| alpha-l-arabinofuranosidase | CUU80_10360 | Not Available | Negative | 2575953 - 2577479 | 56185.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


