Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | CUU80_10265 | Not Available | Positive | 2550324 - 2550908 | 21023.1 |
| trna (guanosine(37)-n1)-methyltransferase trmd | CUU80_10270 | Not Available | Negative | 2550937 - 2551770 | 30615.4 |
| collagenase | CUU80_10275 | Not Available | Positive | 2551862 - 2553496 | 60039.6 |
| laccase domain-containing protein | CUU80_10280 | Not Available | Positive | 2553499 - 2554485 | 34545.1 |
| aaa family atpase | CUU80_10285 | Not Available | Positive | 2554763 - 2556325 | 58765.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CUU80_10290 | Not Available | Positive | 2556457 - 2557371 | 32340.3 |
| peptidase c15 | CUU80_10295 | Not Available | Positive | 2557414 - 2558106 | 24779.5 |
| cell division protein | CUU80_10300 | Not Available | Positive | 2558315 - 2559853 | 55542.6 |
| aminopeptidase | CUU80_10305 | Not Available | Positive | 2560090 - 2561436 | 50374.4 |
| hypothetical protein | CUU80_10310 | Not Available | Negative | 2561989 - 2563311 | 49973.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


