Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_10215 | Not Available | Negative | 2537951 - 2538184 | 8052.17 |
| peptide-methionine (r)-s-oxide reductase | CUU80_10220 | Not Available | Positive | 2538692 - 2539708 | 37539.6 |
| putative heavy metal-binding protein | CUU80_10225 | Not Available | Positive | 2540007 - 2540342 | 11762.0 |
| aspartate aminotransferase family protein | CUU80_10230 | Not Available | Positive | 2540981 - 2542342 | 50240.3 |
| methanol dehydrogenase | CUU80_10235 | Not Available | Positive | 2542373 - 2543503 | 40472.3 |
| amidohydrolase | CUU80_10240 | Not Available | Positive | 2543703 - 2545505 | 65145.5 |
| mfs transporter | CUU80_10245 | Not Available | Positive | 2545408 - 2547198 | 65071.8 |
| taurine abc transporter permease | CUU80_10250 | Not Available | Positive | 2547256 - 2548188 | 32980.0 |
| glycine/betaine abc transporter substrate-binding protein | CUU80_10255 | Not Available | Positive | 2548355 - 2549353 | 35013.0 |
| taurine abc transporter atp-binding protein | CUU80_10260 | Not Available | Positive | 2549508 - 2550305 | 29651.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


