Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | CUU80_10160 | Not Available | Negative | 2522777 - 2523793 | 34642.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | CUU80_10165 | Not Available | Negative | 2523790 - 2524698 | 32239.5 |
| g5 domain-containing protein | CUU80_10170 | Not Available | Negative | 2524758 - 2526269 | 52867.9 |
| peptidase | CUU80_10175 | Not Available | Positive | 2526549 - 2529170 | 95269.5 |
| lysophospholipase | CUU80_10180 | Not Available | Positive | 2529176 - 2530273 | 40752.7 |
| vwa domain-containing protein | CUU80_10185 | Not Available | Positive | 2530384 - 2532096 | 59666.0 |
| hypothetical protein | CUU80_10195 | Not Available | Positive | 2532910 - 2534010 | 39147.9 |
| toxic anion resistance protein | CUU80_10200 | Not Available | Positive | 2534279 - 2535262 | 36372.6 |
| hsp20/alpha crystallin family protein | CUU80_10205 | Not Available | Positive | 2535710 - 2536225 | 19077.2 |
| hypothetical protein | CUU80_10210 | Not Available | Positive | 2536884 - 2537942 | 36606.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


