Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CUU80_10055 | Not Available | Positive | 2492116 - 2492781 | 24123.4 |
| chromosome partitioning protein | CUU80_10060 | Not Available | Positive | 2493033 - 2494043 | 36303.4 |
| chromosome partitioning protein parb | CUU80_10065 | Not Available | Positive | 2494043 - 2495446 | 50073.2 |
| hypothetical protein | CUU80_10070 | Not Available | Positive | 2495625 - 2496008 | 14526.5 |
| thioredoxin reductase | CUU80_10075 | Not Available | Negative | 2496124 - 2497338 | 42098.5 |
| very short patch repair endonuclease | CUU80_10080 | Not Available | Positive | 2497452 - 2497940 | 19297.2 |
| nad-dependent deacetylase | CUU80_10085 | Not Available | Positive | 2497998 - 2498756 | 27745.2 |
| threonine ammonia-lyase | CUU80_10090 | Not Available | Negative | 2498886 - 2500151 | 44705.1 |
| glucohydrolase | CUU80_10095 | Not Available | Negative | 2500437 - 2502260 | 68621.7 |
| nagc family transcriptional regulator | CUU80_10100 | Not Available | Positive | 2502621 - 2503838 | 42689.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


