Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | CUU80_10000 | Not Available | Negative | 2481179 - 2483269 | 76933.7 |
| duf721 domain-containing protein | CUU80_10005 | Not Available | Negative | 2483609 - 2484079 | 17329.9 |
| dna replication and repair protein recf | CUU80_10010 | Not Available | Negative | 2484076 - 2485500 | 50637.6 |
| dna polymerase iii subunit beta | CUU80_10015 | Not Available | Negative | 2485559 - 2486683 | 40951.4 |
| chromosomal replication initiator protein dnaa | CUU80_10025 | Not Available | Negative | 2487538 - 2489073 | 56602.3 |
| 50s ribosomal protein l34 | CUU80_10030 | Not Available | Positive | 2489389 - 2489523 | 5377.74 |
| ribonuclease p protein component | CUU80_10035 | Not Available | Positive | 2489558 - 2489905 | 13034.9 |
| membrane protein insertion efficiency factor yidd | CUU80_10040 | Not Available | Positive | 2489907 - 2490224 | 12142.6 |
| hypothetical protein | CUU80_10045 | Not Available | Positive | 2490221 - 2491231 | 38493.5 |
| hypothetical protein | CUU80_10050 | Not Available | Positive | 2491375 - 2491908 | 20099.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


