Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CUU80_09880 | Not Available | Negative | 2449585 - 2452713 | 108025.0 |
| 3-isopropylmalate dehydratase small subunit | CUU80_09885 | Not Available | Negative | 2452934 - 2453626 | 26044.9 |
| 3-isopropylmalate dehydratase large subunit | CUU80_09890 | Not Available | Negative | 2453640 - 2455043 | 50142.0 |
| iclr family transcriptional regulator | CUU80_09895 | Not Available | Positive | 2455396 - 2456160 | 26852.3 |
| serine/threonine protein phosphatase | CUU80_09900 | Not Available | Negative | 2456603 - 2457931 | 48095.9 |
| rna degradosome polyphosphate kinase | CUU80_09905 | Not Available | Positive | 2459180 - 2461417 | 83915.4 |
| nudix hydrolase | CUU80_09910 | Not Available | Positive | 2461713 - 2462801 | 40149.1 |
| hypothetical protein | CUU80_09915 | Not Available | Positive | 2462791 - 2463612 | 28664.8 |
| fmn-binding protein | CUU80_09920 | Not Available | Positive | 2464156 - 2464722 | 18907.3 |
| hypothetical protein | CUU80_09925 | Not Available | Positive | 2464798 - 2465709 | 32256.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


