Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium scaligerum |
| Strain | strain TRE D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
554651 bp
Thymine Count
551962 bp
Guanine Count
770391 bp
Cytosine Count
775084 bp
Genome Length
2652159 bp
Protein-coding Genes
1961 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5107 domain-containing protein | CUU80_09780 | Not Available | Negative | 2421280 - 2424624 | 124947.0 |
| arac family transcriptional regulator | CUU80_09785 | Not Available | Positive | 2424831 - 2425760 | 34202.4 |
| duf1778 domain-containing protein | CUU80_09790 | Not Available | Positive | 2425980 - 2426249 | 10215.9 |
| n-acetyltransferase | CUU80_09795 | Not Available | Positive | 2426240 - 2426749 | 18708.4 |
| septum formation protein maf | CUU80_09800 | Not Available | Negative | 2426816 - 2428273 | 51975.9 |
| homoserine kinase | CUU80_09805 | Not Available | Negative | 2428531 - 2429622 | 37781.7 |
| homoserine dehydrogenase | CUU80_09810 | Not Available | Negative | 2429729 - 2431045 | 45968.0 |
| diaminopimelate decarboxylase | CUU80_09815 | Not Available | Negative | 2431448 - 2433052 | 56927.9 |
| arginine--trna ligase | CUU80_09820 | Not Available | Negative | 2433235 - 2435073 | 66850.3 |
| tetr family transcriptional regulator | CUU80_09825 | Not Available | Positive | 2435261 - 2435932 | 25760.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


